That made me curious, because I use akeeba and have restored the sites, but in this instance I'm working with a matrix joomla 3 installation.
I checked the database looking for the "0" under component Id vs. menu as the forum post suggested, but I found something quite different (pls. see attached screenshot) - I see duplicate entries of k2 items in menu table.
I have tested it from the scratch: uninstalled k2, deleted the duplicate tables (remaining after uninstalling) - installed k2 again - same issue.
tried again, this time removing k2 + xmap, cleaned up db entries and installed k2 first => OK; then xmap => OK
Somewhat confused, but would like your opinion whether you're aware of this incident and if this has something to do with akeeba.
Thanks,
AZ