Backup quotas are applied per profile, not globally. This means that if you have several backup profiles you need to set up quotas on each profile and it will only apply on the backup records of that specific backup profile.
Backup quotas only apply to backup records, not backup archives. This means that if a backup is NOT listed in the Manage Backups page Akeeba Backup does NOT know about it and it will NOT participate in quota management. Otherwise quota management would be too slow to be practical (in fact, it would cause the backup to crash). That's because discovering backup archives, especially on remote storage, is a time and memory intensive process. We have determined that when you store more than 50 backup part files on remote storage the time it takes to analyze them for quota management purposes is greater than the safe time limit of ~7 seconds (after which there's a > 10% chance of causing a backup failure due to timeout).
Backup quotas are applied, by default, to local files only. If you want remotely stored files, e.g. on Dropbox, to participate in quota management you MUST check the Enable Remote Quotas checkbox.
All of this information can be found in our documentation. Please consult the documentation, do not make assumptions on how things work. According to our experience, if you ask 10 people how quotas work you will get 12 different answers. Yes, more answers than the people you ask - true story! The way we have implemented quota management is how the majority of people expect them to work with the added twist that they are calculated against backup records in the database instead of files for the reasons I explained.
Regarding ALICE, it's designed to run against the log files of failed backup attempts only. If the backup is not failed it does get confused and produces nonsense results.
I hope this information helps!
Nicholas K. Dionysopoulos
Lead Developer and Director
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