Upgraded from v4.1.1 to v4.1.2 using the Joomla extension upgrade function on four different sites, using two separate hosts, both have the same issue. Upgrade of Akeeba Pro results in the backup scripts being removed from the CLI directory, but not replaced.
First time I find out about it is when I get a notice that the CRON job could not find the file. I did search the previous tickets, but they talk about the Download ID being invalid, but I verified this and they are the same as I have setup here.
Not a big thing, but the fact that it happened at two different hosting companies may point to a installation/upgrade script issue.
A reinstall of the full package corrected the issue.
Not a show stopper, just a pain in the butt.
Cheers,
Neil Zampella