Have I read the related troubleshooter articles above before posting (which pages?)? yes
Have I searched the tickets before posting? yes
Have I read the documentation before posting (which pages?)? yes, looked everywhere
Joomla! version: 2.5.7
PHP version: 5.3
MySQL version: (unknown)
Host: (optional, but it helps us help you)
Admin Tools version: 2.3.2
http://spiritualhealingx.com/
Description of my issue: When activating the .htaccess maker, I get a good result with the templates that come with joomla, but when my own custom template is set as deafult, it resolves on screen with zero styling, as if the template is not loading. The template I am using is of yootheme.com and is called sphere, it is repsonsive and developed a couple of months ago if that helps. I have removed the .htaccess file for now but if you want me to put it back so you can see the issue then I can do that.
Thank you Nicholas
Jonny